Phase Microscopy: Yeast

/home/administrator/repos/cellSAM/examples/plot_yeaz.py:13: FutureWarning: `napari.view_image` is deprecated and will be removed in napari 0.7.0.
Use `viewer = napari.Viewer(); viewer.add_image(...)` instead.
  nim = napari.view_image(img, name="YeaZ");

import imageio.v3 as iio
import napari

from cellSAM import cellsam_pipeline
img = iio.imread("../sample_imgs/YeaZ.png")

mask = cellsam_pipeline(img, use_wsi=False)

nim = napari.view_image(img, name="YeaZ");
nim.add_labels(mask, name="Cellsam segmentation");

if __name__ == "__main__":
    napari.run()